tagSNPer
will determine a set of tagging snps within a haplotype dataset.
formatter
is a program that will convert genotype data between a number
of formats. It allows the conversion from and to PHASE, CSV,
hapmap and pedigree format. It will insert missing parents
into a dataset if preparing input for TRANSMIT. - Some of the modules used to create this are now available via CVS as part of the Bio::PopGen::IO branch of bioperl (www.bioperl.org)
LAURF
is for conducting Linkage Accounting for Uncertainty in
Recombination Fractions